Heatmap (static) of thromboQTL asssociation mapping
GAIT2, MAF >= 0.01, genome-wide suggestive level < 1e-5
April, 2015
Heatmap
- 81 traits are on the y axis.
- Up to 250 bins (each of 1Mb size) per chromosome are on the x axis.
- 22 chromosomes represent the separate panels.
- Color encodes the number of associated SNPs (the genome-wide suggestive level) inside a bin.
Summary table
- N is the total number of SNPs associated with a given trait at the genome-wide suggestive level.
| TEG |
inorm_CT_intem |
996 |
| TEG |
inorm_CT_intemuk |
295 |
| TEG |
inorm_CT_natem |
1229 |
| TEG |
inorm_CT_tiftem |
456 |
| TEG |
inorm_CFT_intem |
4482 |
| TEG |
inorm_CFT_intemuk |
3077 |
| TEG |
inorm_CFT_natem |
354 |
| TEG |
inorm_CFT_tiftem |
256 |
| TEG |
inorm_alpha_intem |
3670 |
| TEG |
inorm_alpha_intemuk |
2550 |
| TEG |
inorm_alpha_natem |
451 |
| TEG |
inorm_alpha_tiftem |
279 |
| TEG |
inorm_MCFt_intem |
1818 |
| TEG |
inorm_MCFt_intemuk |
886 |
| TEG |
inorm_MCFt_natem |
903 |
| TEG |
inorm_MCFt_tiftem |
599 |
| TEG |
inorm_MCF_intem |
1523 |
| TEG |
inorm_MCF_intemuk |
1010 |
| TEG |
inorm_MCF_natem |
488 |
| TEG |
inorm_MCF_tiftem |
834 |
| TEG |
inorm_TGTlagtime |
1086 |
| TEG |
inorm_TGTETP |
459 |
| TEG |
inorm_TGTPeak |
364 |
| TEG |
inorm_Lclisis |
2102 |
| TEG |
inorm_LclisisTM |
3232 |
| PFA |
inorm_PFAadp |
1342 |
| PFA |
inorm_PFAepin |
1739 |
| HEMO |
inorm_PTES |
1056 |
| HEMO |
inorm_PCTES |
2033 |
| HEMO |
inorm_LE |
440 |
| HEMO |
inorm_NE |
407 |
| HEMO |
inorm_LI |
2089 |
| HEMO |
inorm_MOt |
389 |
| TE |
inorm_COX1 |
710 |
| TE |
inorm_COX2 |
186 |
| TE |
inorm_mPGES1 |
1010 |
| TE |
inorm_TXAS |
252 |
| TE |
inorm_PLA2G4A |
813 |
| LC |
inorm_e5LOX |
803 |
| LC |
inorm_FLAP |
1060 |
| LC |
inorm_LTA4H |
473 |
| LC |
inorm_LTC4S |
1366 |
| LC |
inorm_LTB4 |
823 |
| LC |
inorm_LTB4ion |
257 |
| LC |
inorm_e5LOX_NE |
2110 |
| LC |
inorm_FLAP_NE |
867 |
| LC |
inorm_LTB4ion_NE |
294 |
| LC |
inorm_LTB4ion_MO |
195 |
| GTF |
inorm_TMTHG |
1010 |
| GTF |
inorm_THRGEN |
580 |
| GTF |
inorm_RTMTH |
178 |
| GTF |
inorm_FIBc |
920 |
| GTF |
inorm_FVIIc |
1003 |
| GTF |
inorm_FVIIIc |
849 |
| GTF |
inorm_FIXc |
930 |
| GTF |
inorm_FXIc |
1798 |
| GTF |
inorm_FXIIc |
1719 |
| GTF |
inorm_APCR |
727 |
| GTF |
inorm_APTT |
2685 |
| GTF |
inorm_ATIIIf |
612 |
| GTF |
inorm_GAB2 |
1393 |
| GTF |
inorm_GACA |
279 |
| GTF |
inorm_GAFS |
1638 |
| GTF |
inorm_GAPS |
1235 |
| GTF |
inorm_MAB2 |
7224 |
| GTF |
inorm_MACA |
652 |
| GTF |
inorm_MAFS |
713 |
| GTF |
inorm_MAPS |
1538 |
| GTF |
inorm_Pcam |
1789 |
| GTF |
inorm_PSfree |
899 |
| GTF |
inorm_PSfunc |
1658 |
| GTF |
inorm_PSt |
797 |
| GTF |
inorm_PT |
686 |
| GTF |
inorm_RUSSELL |
384 |
| GTF |
inorm_TT |
496 |
| HOMO |
inorm_CYShplc |
2299 |
| HOMO |
inorm_HCYhplc |
549 |
| HOMO |
inorm_METhplc |
532 |
| HOMO |
inorm_SAMhplc |
829 |
| HOMO |
inorm_SAHhplc |
1921 |
| HOMO |
inorm_SAMsah |
1219 |