annotate. solarius 0.3.1

Usage

annotate(x, mode = c("significant", "top", "all"), alpha = 0.05, num.top = 10, ...)

x: An object of class solarAssoc or a character vector of SNPs.
mode: A character with the mode of SNPs selection. Possible values are "significant", "top" and "all". The default value is "significant".
alpha: A numeric value from 0 to 1, the significance level after Bonferroni multiple-test correction. Corresponds to mode equal to "significant".
num.top: An integer value, the number of top SNPs to be annotated. Corresponds to mode equal to "top". The default value is 10.
...: Additional arguments passed to annotateSNPs.

A data table with annotation results.

The function calls annotateSNPs function, which does the job.